I would like to share my latest project named GRIMER, which was fully based on the awesome bokeh library. GRIMER analyses table of measurements from microbiome DNA analysis and creates a custom report/dashboard as an output.
The goal was to create an interactive and offline report/dashboard that can easily be sent by e-mail or shared. The report has several plots and interactions which are useful to understand composition of samples and detect contamination in microbiome studies.
It was a challenge to make it fully offline but a pleasure to work with bokeh and such a nice community support here. A big thanks for making that possible.
Here’s an example of a GRIMER report/dashboard: GRIMER - Placenta Study WGS
An more links:
Code: GitHub - pirovc/grimer
More examples: grimer-reports
Publication: Contamination detection and microbiome exploration with GRIMER | bioRxiv